rs212776460 SNP Detail

Summary

• ID
  rs212776460
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77920847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCTCTCA CACTTTCGTA
  TCATCCTCAG CTGCAACTCC TACAATGTGC AGGCTACTCT CCTGAGTGCT GCAGCTGGCT
  AGCATGGGGG TCAGCTCTTT TGCTCTCATA CCCCCAGGAC CAGTTCTCCC ATGATGCCCA
  GGTGAGTGGT GGGGCAGTTC TGCACAACCT TCAGACATCA ACATGTCCCC AGGCAGCAGC
  M
  CAGATCAGGG ACCTCTGCCT GGCTTTTGGT GGTAACAGAC CCCTGCTACT CCAGAGCCAC
  TGACCCAGAC ATGACCCTCA ATGGAGCATA GGCCAGGACC CCACCATGAT CCTAGTGGCA
  TCACATCACA GATGTGGCCA CTCACATCAA GCTGTTCCTC ACTACCCTCA AGTCTCTACA
  TCTGCCTCTC TCCCTTATAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323015016	CHEV_9_77861372	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212776460					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77920847 () rs orientation: forward

Symbol	Name	Function Class
Gm23609	predicted gene, 23609	407 bp downstream
Gm39375	predicted gene, 39375	1453 bp upstream
Gm69108	predicted gene, 69108	within coordinates
Rr683457	regulatory region 683457	471 bp proximal