rs212785982 SNP Detail

Summary

• ID
  rs212785982
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:71697119 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATTTCTCTT ATAACCATTA CACTATATCA
  AGAGCCCGTG CAGGCTTGCT TACAGACTGC TTTAGTGTCT GAGGTGCCCC AGTGTTCGTT
  TTATCTGTAT TGGTGAGCTG CTAGGGATTG GGCACAGGCT cacacacaca cacacacaca
  Y
  acacacacac acacacacac acacacacac acGGCAGGCA TGCTCAACTA AAGAGATACA
  GCCTAACGCC TAAAGGAAAC GCTTAATGGT ATGTATTTTC TAGCTATAAG AAAAAAATAA
  AAGCTACAGA GGAATCAATT CATACTTTTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325442931	CHEV_17_71739464	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212785982					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:71697119 () rs orientation: forward

Symbol	Name	Function Class
Gm38220	predicted gene, 38220	1714 bp downstream
Rr332887	regulatory region 332887	919 bp distal
Smchd1	SMC hinge domain containing 1	within coordinates