rs212799574 SNP Detail

Summary

• ID
  rs212799574
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:93453445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAG CCCAAATTTA TCAGGGGACG
  C
  CCAAGTTTCC AGTTCAATGC AATAT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321615088	CHEV_5_93734612	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212799574					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:93453445 () rs orientation: forward

Symbol	Name	Function Class
Gm72287	predicted gene, 72287	within coordinates
Tssr51943	transcription start site region 51943	840 bp downstream
Tssr51944	transcription start site region 51944	852 bp downstream
Tssr51945	transcription start site region 51945	864 bp downstream