rs212819201 SNP Detail

Summary

• ID
  rs212819201
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:83182962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTCAGAttt ttttttttta agaattactt
  atttattgta taggagcaca ccttaacaat cttcagacac accagaaacg ggcaccagat
  cccattacag atggttgtga gccactatgt ggctgctggg aactgaactc aggacctctg
  R
  aagagcagtc agtgcccttT TTCTtttctt ttctttttaa agatttattt atttattata
  agtaagtata ctgtagctgt cttcaggcac accaaaagag ggcgtcagat cttattacgg
  atggttgtgg gccacAACTA GCTTTAAAgg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325036148	CHEV_15_83129191	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212819201					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:83182962 () rs orientation: forward

Symbol	Name	Function Class
Arfgap3	ARF GTPase activating protein 3	978 bp downstream
Gm32788	predicted gene, 32788	1971 bp upstream
Rr304705	regulatory region 304705	within coordinates
Rr310865	regulatory region 310865	145 bp distal
Rr314786	regulatory region 314786	1363 bp distal
Rr314787	regulatory region 314787	39 bp proximal