rs212826815 SNP Detail

Summary

• ID
  rs212826815
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117429443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCTCTCTT GCAGAGGACC
  TATACTCAAT TCCCAGCACC CATGTCCAGT AAGTCACAAA GGCCTGTAAG TCTAGATCCA
  GAGGGTCTGA AGCCCTCTTT TGTACTCTGC ATGTATCTGC GCATGCATGG GGCACACACA
  CACACACACA CACACACACA CACACGGTAG CACAGAAACA AAAATAAATC TAATAAAAAA
  R
  TGAAAGAAAA AATTTTTTTC AAAATCAAAT ATCTTCTTGC CAAAGCTCCT GGTTCCACAC
  TAGCATGCTG AAAATGAGCT ACTAATCAAG ATCACTGCTC AGCTGCCTTT AGAGGCAGAG
  CCCCTAGAAC TCGTAAGTAT CGTGATACCT TTCTCATTGA ATTATCATTT TTCTGTTGAT
  GATTTATTTT GCTTTCAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323497989	CHEV_10_117030594	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212826815					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117429443 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2233	CpG island 2233	519 bp proximal
Gm63651	predicted gene, 63651	1188 bp upstream
Kifc5c-ps	kinesin family member C5C, pseudogene	815 bp upstream