rs212831185 SNP Detail

Summary

• ID
  rs212831185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:53882379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAGAATTA AGGAGAAAAT
  GGCTGAGTTT ACTGTTATAA CAGCAACATC ATAAAAATTA GTAATATCTT CAACTGCACT
  TATAAAATTA TGATGTTGAC AATTGTAATC ATATACATGC ACTTCTAATC GAGGAACTGA
  ATGTCCTTCC TTTTGATAAT TAGCTTTAAG TGAGGTAGCA GAACAGAGTG TTTGTAGAAG
  R
  GGATGAAGGA GATTCAAGTT TTATCTGAGA AACAGGAGGT GGAGGCATTG GCAGGCTCAG
  TTTGGCCAGA AAACAGCAAG GCAACAGCTG TCATTTCCTC TGCTAAGAAC TAGAGCTAGA
  TCCAAAGCCA GTCCAGTTGG GGAAGGAGAT GCTAGCTGAA CGAAGGGGGA CCAGAGCCCC
  TTCTCCTTCC CCATCTCTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320770161	CHEV_3_53778880	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212831185					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:53882379 () rs orientation: forward

Symbol	Name	Function Class
Gm64314	predicted gene, 64314	within coordinates
Rr397671	regulatory region 397671	144 bp upstream
Rr576760	regulatory region 576760	20 bp proximal