rs212863957 SNP Detail

Summary

• ID
  rs212863957
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:115149327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATGCAGCA TCTGCTTACA
  GATGATACAA ACTTCTCTGG GGGGGGAGGG TGAGAACGAG GTGGGGAACT GCTACCCCCC
  CCCCCCCAAG GAAGGAATCC CAGTGCAGTT TCCTTGTGTT AGTTAAAACC TTGGCTTCTG
  TAATGGAATC CTTACACTGT CTACACTGAG TCACATAAAA ATCTCAGCTG TGATGTTACC
  K
  GTCCTGAGAT CCACCATAGC CCACCTTCCC AGTGTGGGTC AGACCGGCTT CTTGCCACAG
  ACCTGGAAAT CATTCATCAC CTTTAGCACT GAGGCGTCTT AGAAAATATA TAATGTGAGC
  ACAATTGTTT TGTGTGTTCT TTTGAGACAG GGTCTCACTG GGTAGCACTA GCTGGTCTGG
  AACTTATTCT GCAGATCAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323484092	CHEV_10_114750478	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212863957					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:115149327 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2204	CpG island 2204	1392 bp proximal
Rab21	RAB21, member RAS oncogene family	within coordinates
Rr439191	regulatory region 439191	1330 bp distal
Rr439192	regulatory region 439192	148 bp distal
Tssr95806	transcription start site region 95806	1609 bp upstream
Tssr95807	transcription start site region 95807	1661 bp upstream
Tssr99318	transcription start site region 99318	1453 bp downstream
Tssr99319	transcription start site region 99319	1487 bp downstream