rs212865595 SNP Detail

Summary

• ID
  rs212865595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:114119150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGTGTGAA TTATATGTGA ATTACTAGAC
  AATAAAATCC CTCTCCCACT GGGATTAAAG AGTATCTGGC AGTATAGGCT TTTGTTTGAA
  TTCAatatgt aatatatata tatatatata tatatatata tatatatata catatatata
  Y
  aCACACACAC ACATTTATGT GTAAGAGATG TAAGACATTG TGTGTGTGAA ATATAGATGC
  TAAGAGAAAT AGTATGTCAC TGACCGGTAT GGTCATTATA TCAAGCTCTG TGGTTAATGC
  TTGTGTGAGG GCTGTAATGT ATAGAAGAGA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324533155	CHEV_13_114772822	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212865595					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:114119150 () rs orientation: forward

Symbol	Name	Function Class
Arl15	ADP-ribosylation factor-like 15	Intron
Rr486631	regulatory region 486631	490 bp distal
Tssr121196	transcription start site region 121196	1119 bp downstream