rs212884322 SNP Detail

Summary

• ID
  rs212884322
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107903321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCGATCAAT CACAGCCAAG
  ACACTGATAT CTTGAGCACA TCCCATTACA TCTAAGGGCG GAATGGTTTT CTGGGAAGAG
  GGAGGCAAGA GCTAATGAAA CCACAGCCTT GGCACAGGCT GCTGGCACAG GGTGCCCAGC
  CTGAAACTTT CTTTTCCCAT CAGCAAAAGT CACTGGAACT TTGGGGATGG GGGGGGGGGT
  Y
  ACTGAGTTTT CTGTTTCTCA AAGGACTAGT GTGTCTTGAC GTGCAAAAGC TATAGACAAG
  GATCAGAGAG AAAATGTAAA CAAATACTAG TGTGAGTGCT GTTAGAACAG GAAGCCGCCA
  TTTTTTTTCT CAGACCTATA CCAGCTACAC CGTCATGTCG CAGACTCTGA ATTCATCCTT
  GTCCCTCTTG GCACTTCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324151899	CHEV_12_109175272	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212884322					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107903321 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
Rr387761	regulatory region 387761	within coordinates
Rr472389	regulatory region 472389	1414 bp distal
Tssr117636	transcription start site region 117636	1584 bp downstream
Tssr117637	transcription start site region 117637	1610 bp downstream
Tssr117638	transcription start site region 117638	1675 bp downstream
Tssr117639	transcription start site region 117639	1690 bp downstream
Tssr117640	transcription start site region 117640	1711 bp downstream
Tssr117641	transcription start site region 117641	1731 bp downstream
Tssr117642	transcription start site region 117642	1768 bp downstream
Tssr117643	transcription start site region 117643	1886 bp downstream
Tssr117644	transcription start site region 117644	1997 bp downstream