rs212917420 SNP Detail

Summary

• ID
  rs212917420
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147978858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACCTCTAA ACTCCCTGGA
  GCCTCCAGTC TCTTGAGGGT TAGGTGCATC ATCTCTGAAT GAACACAGAC CTGGAAGTCC
  TCTAGTGGAT ATGTGTTGGG GGCCTCATAT CAGATAGTGT ATGCTGCATG TTTGGTGGTC
  CAGTGTTTGA AAGATCTTGG GGTCCAGATT AATTGAGACT GCTGGTCCTC CTACAGGATC
  R
  CCCTTCTCCT CAGGTTCTTT CAGCCTTCCT AATTCAACAA CAGGGATCAG CTGCTTCTGT
  CCATTGGTTG GGTGCAAATA TCTGCACCTG ACTCTTTCAG CTGCTTGTTG GGTCTTTCGG
  AGGGCAGTCA TGATAGATCC CTTTTTGTGA ACACCCCATA AATTCAGTCA TAGTGTCAGG
  CCTTGGGACC TCCCCTTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321014849	CHEV_3_147936186	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212917420					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147978858 () rs orientation: forward

Symbol	Name	Function Class
Rr375892	regulatory region 375892	741 bp upstream
Rr587183	regulatory region 587183	756 bp distal
Rr587184	regulatory region 587184	454 bp distal