rs212928211 SNP Detail

Summary

• ID
  rs212928211
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:179989568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATTATATC CTGGCGGCAG
  TTTTCCCTCC CTCCACTCCT CCCAGTTCCT TCCCCACTTC CATTCTCCCC CAGATCCATT
  CCTCTTATGC CCCCCCCCCC CAAGAGCAGG CTTTCCATGA ATACCCACCA AACATGGCAT
  AACAAGTTAC AATAAGATCA GGAACAAACC CTCATATCAA GGCTGGATGA GGCAACCCAA
  Y
  AGGAGGAAAA GGGCCCCAAG AGCAGGCAAA AAACTCCCAC TGTTGTGTCT TCTGCTAGAA
  CACAAAGCTA CACAACTATA ATGTATATGC AGAGGACCCA GCTCAGTCTC ATCAGGGTCC
  GTGTTTGTTG CTACAGTTTC TGTGAACCTC TGTGGGCTCT GCTTAGTTGG TTCTGTGGGT
  TGTGTTCTTG TGGCATCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320631893	CHEV_2_180082480	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212928211					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:179989568 () rs orientation: forward

Symbol	Name	Function Class
Gm52543	predicted gene, 52543	1284 bp upstream
Gm75553	predicted gene, 75553	within coordinates
Rr572721	regulatory region 572721	208 bp distal
Rr572722	regulatory region 572722	450 bp distal