rs212929926 SNP Detail

Summary

• ID
  rs212929926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:71547225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTCATAG AATAATCAAA
  AGGGAGTCTG GAGGAAATAG CTGAAGTGAT AGTAAATAAG AACGGGACGT TTGCTCTGCT
  TGAGATGAGC TCGCAGAAAG CAGTAGCAAT TTTTTTTAAA GAAATTTCTC AAGTGAGAGC
  TGAGCTATCC AAAGATATCT GAAGAGTGAA AACAGCTCTT CAAGAGTTTT TTTTCTAACA
  R
  GATTTCTGAT TTTAGTTGGA AAATCCATGG AAAGCAAACA CAGCTCTTTT AGAATTTTTC
  TGCTTTCTGA TTTTGATCGG AAAACCCAAA GATTACTTGT AGAATTTTTT TCTAACAGGA
  TTTCTGACTT AGTCAGAAGA TTAAGACTTT TTTATAGCAG CTTTTCTGAC TGGTCAGAAA
  ACCCATGAGC TATCCAGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325442178	CHEV_17_71589570	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212929926					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:71547225 () rs orientation: forward

Symbol	Name	Function Class
Lpin2	lipin 2	within coordinates
Tssr145747	transcription start site region 145747	1729 bp downstream