rs212964872 SNP Detail

Summary

• ID
  rs212964872
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110829087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCTGAAAC CACACACAGT
  TAAAGTTTCT GCAGATCGGC GAATTCCCGC AAAATGAACA ATAACCATGT AATAACACCC
  CAAGTCAAGA AAAACAGATG TGAACAAAGC AAAACAATGT TATTATTCCC CGACTCCGCC
  CACCCCTGTC AATCATCTTC CGGCTCCTCC TTCCCAGAGA GGTGGTGATA AAAGAGCTGG
  M
  CTCTGCCAAG CCTTGCGCCC CTTGACCTTC CCGTACTTGC ATTCCTGTGG CTCTTGAGGC
  TGCCCGAGTC TATTGTAGGG CGGGAAAATA ACAATGCGAA GTTGTTTATC TGTTCCCAGG
  TCAGTGGCTA CCTGTGTCTA TGGTTGGCAG TCAGGCAACT CAGGGAGTTT TCACACCACA
  GGAATTGGCA AATGCTACAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195302	CHEV_9_110902523	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212964872					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110829087 () rs orientation: forward

Symbol	Name	Function Class
1700061E17Rik	RIKEN cDNA 1700061E17 gene	within coordinates
Gm10030	predicted gene 10030	within coordinates
Rr687273	regulatory region 687273	258 bp distal
Rr687274	regulatory region 687274	within coordinates
Rr687275	regulatory region 687275	28 bp proximal
Tssr91675	transcription start site region 91675	1872 bp downstream