rs212983892 SNP Detail

Summary

• ID
  rs212983892
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:81911745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACACCAAGC GGTCTCTGGT AGGTGGCTAA
  CCTTTCCTAC CGAATCTTGT TTAAGAACTG ACAGAGAGGT ggggctgtag aggtggctca
  gcagttaaga gaacatatcc tgtccatgca tcgtacccag gttctggtcc cagcatccac
  R
  tggtggctca cagccaacca tactttggtt tcaggagact agaccccttc tgacctctgc
  atgcatgagg catgcacgag gcgtgcacat gctgcacata catacatgca gataaaTAAA
  TCTTTAAACA ACAGGagctg gacatgatgg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325033188	CHEV_15_81857974	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212983892					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:81911745 () rs orientation: forward

Symbol	Name	Function Class
Rr506381	regulatory region 506381	98 bp proximal
Tssr132336	transcription start site region 132336	481 bp upstream
Tssr132337	transcription start site region 132337	510 bp upstream
Tssr132338	transcription start site region 132338	545 bp upstream
Tssr132339	transcription start site region 132339	567 bp upstream
Tssr132340	transcription start site region 132340	964 bp upstream
Tssr132341	transcription start site region 132341	1659 bp upstream
Tssr135523	transcription start site region 135523	305 bp downstream
Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6	within coordinates