rs212990030 SNP Detail

Summary

• ID
  rs212990030
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:174503623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTACTAT GACATACTGA
  GTTTATGGGG AAAGTAAAGA GGGATTCTGA GGTGGAGAAG GGCGGGTTAT TGAGGTACAT
  TCTTTCTTTT TTTCTTAGTA TATCAAATGA CTAACACTAC ATCTAAATGT ATCTAAAATA
  TCCATGGAAA ACTGTGAGTT GAAAGGTTTT TTTTTAATTT TTTAAAAATT TTTCATTTTA
  Y
  TTCATGTTGA GAAAAATGAA CAAAGGTGTC CTAAGTTATA TTTTTAAAAA TATTAAAAAT
  GAAGCTAAAC CTTGGAAGTC AATCCTATTA GAAGTTCAAA TGAAGAAAAA CGTGAATAAA
  GGGAGAGAGG GAACAAGTTC TACACCCCTG GGTGATTGCC CAGCTCTAAT CCAATTTAAA
  AGATGGGTTG GGGCGGGAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320143656	CHEV_1_176606188	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212990030					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174503623 () rs orientation: forward

Symbol	Name	Function Class
Fmn2	formin 2	Intron
Rr423785	regulatory region 423785	1138 bp distal
Rr423786	regulatory region 423786	1212 bp distal