rs213047079 SNP Detail

Summary

• ID
  rs213047079
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13335226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCAGGCCT TTACTCCCAG
  AATTTGGGAG ACAGAGGAAA CTAGATCTCT GATTTGGGGA TAGCCTGTCT ACATAGTGAG
  TTCCAGGCCA GCCAAGGATA CATACTGAGA CCCTCCACCC CACACCCCTT ATGGTCTTCC
  CCACTACTCC CGCCATAAAG AAAGTGCCTG GCGAAGCAGC TCAGTGTGCT CACTGCATGA
  R
  CTGGACAGCT GAGTTCCACC CTCAGAGCCT ACACAAGAGG GAAAGGGGAG GGGAGGGGAG
  GGGAGGGGAG GGGAGGGGAG GGGGGAGAGG AGGGAAGAAC TGACTCCACA TGTCCACCTC
  AGAATAAAAG AAATGATAAG ATTTATTTCT ATTTTATGTG TATTTTATGT CTGCATGTCT
  AGTGCCCATG GGAGCCAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505803	CHEV_8_13285226	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213047079					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13335226 () rs orientation: forward

Symbol	Name	Function Class
9530085L11Rik	RIKEN cDNA 9530085L11 gene	126 bp downstream
Cpgi20111	CpG island 20111	1852 bp proximal
Dcun1d2	defective in cullin neddylation 1 domain containing 2	within coordinates
Rr659902	regulatory region 659902	1809 bp distal
Rr659903	regulatory region 659903	1654 bp proximal