rs213093439 SNP Detail

Summary

• ID
  rs213093439
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:75234937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCC AAGAACAGGG CCAGAGGCAG
  R
  GAAAGGGTGA AGGACCCTAC AGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322267501	CHEV_7_82730075	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213093439					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:75234937 () rs orientation: forward

Symbol	Name	Function Class
Akap13	A kinase anchor protein 13	within coordinates
Rr649259	regulatory region 649259	within coordinates
Rr649260	regulatory region 649260	1936 bp proximal
Tssr67241	transcription start site region 67241	509 bp upstream
Tssr67242	transcription start site region 67242	990 bp upstream
Tssr67243	transcription start site region 67243	1014 bp upstream
Tssr67244	transcription start site region 67244	1035 bp upstream
Tssr67245	transcription start site region 67245	1072 bp upstream
Tssr67246	transcription start site region 67246	1090 bp upstream
Tssr67247	transcription start site region 67247	1118 bp upstream
Tssr67248	transcription start site region 67248	1174 bp upstream
Tssr67249	transcription start site region 67249	1197 bp upstream
Tssr67250	transcription start site region 67250	1230 bp upstream