rs213102094 SNP Detail

Summary

• ID
  rs213102094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28390889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACTC CTTGAATGGA TGCTGGGGGT
  Y
  ACCACCTCTC CTTCGGGTCT GGGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322125993	CHEV_7_29476483	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213102094					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28390889 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18715	CpG island 18715	1595 bp proximal
Fbxo27	F-box protein 27	1385 bp upstream
Rr644337	regulatory region 644337	1203 bp proximal
Tssr65494	transcription start site region 65494	1352 bp upstream
Tssr65495	transcription start site region 65495	1391 bp upstream
Tssr65496	transcription start site region 65496	1539 bp upstream
Tssr65497	transcription start site region 65497	1548 bp upstream
Tssr65498	transcription start site region 65498	1568 bp upstream