rs213126614 SNP Detail

Summary

• ID
  rs213126614
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:6552999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCCCTGCAA AGTGCCCTGG AGAGGTAGAG
  CCCAATGATA TTGGCTCTGG AGCACTTTAG CCCCTCTTTC TAAAATAGCA CCTCAGTGTT
  GTGTTGTATT TGCTCTTTAG GGGttttttt tttttttttt tttggtttgt ttgttttttt
  K
  tttttttGTA TTAGTGCTTT AGTAACTAGA CTGCAAACTC TGTGAGTGGA AAAAATTGTC
  TTTTATGCAC GAGTCACCAG CCTGGATCTG GGAGAGGTTC CTAGCAAGGA CAAAAGTCCC
  AGTGAGCTGC ACAAGAGTTC CCTGAGTTCA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319618705	CHEV_1_6472856	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213126614					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:6552999 () rs orientation: forward

Symbol	Name	Function Class
Rr407512	regulatory region 407512	618 bp proximal
Rr407513	regulatory region 407513	666 bp proximal
Tssr5834	transcription start site region 5834	within coordinates