rs213141143 SNP Detail

Summary

• ID
  rs213141143
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130299891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATGAAGGA TAAATGATAA TCTACGCATA
  TTGGCATTGG AAATATGACT GTAAAATGGG GACGGGGTTG CCTCCCCATC TGGTGGAGGT
  CCACGGGCCC AGCCTGGGCT GCAGCAGTGT TCACAGCTAC TCAGAGAGAT TCCAGATCCT
  T
  TAAAGGATTG TTTTCCATTG TTTTCAAGCT ACAATTTTCT CCTCATTTAA AAGGGGAAAA
  TAGTAAAAGA GGAAAGAAGG AAAAACGCAT GGCCCTTCTT TTTTAATGAA GGGTTCAGCT
  GGAGTGACCA CTCCATTCCA GCTCAATGCC                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319971989	CHEV_1_132268731	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213141143					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130299891 () rs orientation: forward

Symbol	Name	Function Class
Rr417908	regulatory region 417908	67 bp proximal
Rr417909	regulatory region 417909	174 bp proximal
Rr417910	regulatory region 417910	1623 bp proximal