rs213151366 SNP Detail

Summary

• ID
  rs213151366
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54871742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAC CATCAAAGGT CTGGGAAGCC
  G
  TAATAACCAC AATTTGTATC ACTGA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324638728	CHEV_14_55253122	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213151366					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54871742 () rs orientation: forward

Symbol	Name	Function Class
Cdh24	cadherin-like 24	within coordinates
Cpgi6468	CpG island 6468	1673 bp distal
Rr289238	regulatory region 289238	within coordinates
Rr295556	regulatory region 295556	within coordinates
Rr299444	regulatory region 299444	742 bp distal
Rr299445	regulatory region 299445	459 bp proximal
Tssr128611	transcription start site region 128611	1996 bp upstream
Tssr128612	transcription start site region 128612	1971 bp upstream