rs213157383 SNP Detail

Summary

• ID
  rs213157383
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:178048784 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTAACAAGG AAAAATTTTG TATTGCCAAT
  TTAAAAAAAT CTGCATTATA CTTGAAAAGT TTACTGCTGA GGGATTCATA GCATGCATGT
  ATAAAGTAGA TTTTGTTTAG TCAAAACAGA TAACTCTAGT TTGTATTTAT GAAACAATAT
  W
  CTCagccaaa tgtggtgtca caaatctgta atctctctca ggaggtgagt caggaagatt
  gtgagttcca actagcttgt ggtgtgtacc aagacccttt ctcaaaaTGT GCTTGTAAAT
  GTGTTCTTGG GTCATTTGTT ACAAATTAGT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320159405	CHEV_1_180151349	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213157383					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:178048784 () rs orientation: forward

Symbol	Name	Function Class
Desi2	desumoylating isopeptidase 2	Intron
Rr424085	regulatory region 424085	1039 bp distal