rs213176350 SNP Detail

Summary

• ID
  rs213176350
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4558795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGCCTGA GGTGGTTTTA
  TGAAAAATGT CCTAACCCTA GAGTGAACAT TCTGCATGGT AGCCACAAAC AATACAGGAA
  CATAGGTTTA TCTCTGTTTT TGTTTGCTTA TTGCACATTT GTTTGTTTAT TGTATGTTGT
  GATGTTTGTA TGTACGTGTT GCAAGTGGTA AGTGGATATC CACTGCCCCC TCCTCTACAA
  M
  TGTCCACAGT GTTTATTTTG TTTTGTTTTG AGATGGGGTC CCTAATTGAA CCTGGAGCTG
  GCAGTCTCAG CGAGGCTGGT TGGCCGGCAA GCTCCCATGC CCACTTGGAT CTCCCATCTC
  TGCCTTCTTA GCACTGGGAC TACAAATGTA ACTGGCCAGC TTTTTCTGTG GTGCTAGGGA
  TGAGACCTCG GGTCCTCATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873958	CHEV_12_4515603	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213176350					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4558795 () rs orientation: forward

Symbol	Name	Function Class
2900045O20Rik	RIKEN cDNA 2900045O20 gene	within coordinates
Rr265385	regulatory region 265385	805 bp proximal
Rr267453	regulatory region 267453	796 bp distal
Tssr112556	transcription start site region 112556	1555 bp downstream