rs213185067 SNP Detail

Summary

• ID
  rs213185067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59910391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGAGGGT GATACTACTA
  TGCAGCAGGC AGAGGCCAGG GTCACTCCAG AACATCCTTA GCCAGCCCAA AGCACACAGG
  TGGCCGGGAG TGCCCAGCCA CAGTGAGCAC GTAGACAAGC TCAGGCTGAT CTGTAGAGTC
  TGGCTGTCTA GGATCATGAG CAGCCTGTGT AAGATTCAAG AGTCTGGGTG CAGTTCCCTG
  Y
  AGAGCACCTC ACTAGTGAGG CCGGGGCTGA TTCCTTCCTT GCCAAGGTAA AAACTAACAA
  AACCAAACAC CTCAATCAAT GAAAGCATAT ATACTTGCAA CAAAATAAAT ACATTTGTCC
  CCAGAACAGA AGTTTAGCTT TGCTAACTTT CAACAGTTAC TTACATGCTC AGGTTTGTCT
  TTAAGAAGTT GTTTTATCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324358093	CHEV_13_59863938	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213185067					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59910391 () rs orientation: forward

Symbol	Name	Function Class
Gm49354	predicted gene, 49354	within coordinates
Isca1	iron-sulfur cluster assembly 1	within coordinates
Rr276825	regulatory region 276825	1591 bp distal
Rr281504	regulatory region 281504	209 bp proximal