rs213189485 SNP Detail

Summary

• ID
  rs213189485
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:99869041 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTAGGTTG TCAAGAAGTG
  GGTCCATAGG TGCCCGCTTG GCATATGTCT GGAGAGGTTG GTGGACAGCA ACCAGGCCCA
  CTGCTGGAAG GTTGACCTAA ACCAGTCACA CAGCAAGGGG GATGGCAGGA AGGAGATTGG
  CAGCCACTCT GATCGGGAGT GGGTCCACCA CAAATCTGTT GGCCAGAAAT CATAACACAC
  R
  AAGCTGATTT ACTGCTGCTC TTTAAAAAAC AGGGGGACTG GCAGGGAGCC ACAGGCTGGC
  AGATGAAGGA GATTATAGGC GTTGTTTGAC AGTGAAGTGG CTGGCAAGTG GGGGGCACAC
  AGCAAGTTTG ACTGCAAAAG CACATACAAG TTAATGGCTG GCAGGAGACA GACATGCAGG
  GAGTTGACTG GCAGGACTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323830085	CHEV_11_99839529	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213189485					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:99869041 () rs orientation: forward

Symbol	Name	Function Class
Krtap29-1	keratin associated protein 29-1	within coordinates
Tssr110719	transcription start site region 110719	882 bp downstream