rs213196143 SNP Detail

Summary

• ID
  rs213196143
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116515382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTTTGCAC CATGTAAGAA GAATGAGAGG
  GTAACAGCCA TACCTAAACA AAACTTTGAA GAAGATAAAA GTTAAAAGTC TTTTTTTTTT
  TTGTTCtgtg gcggtttgaa taagaatggc gtccataggc tcgtagattt gaatgcttag
  R
  gagtggtctt aggacactac tatgtctttg ttgaggtagg tgtggccttg ttggagaaaa
  tgtgtcactg gggtttcaaa tgctcaagcc aggcccagca tctctctctt cctgctgcct
  gcagaggcgg aggtagaact ctcagcccct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323490249	CHEV_10_116116533	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213196143					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116515382 () rs orientation: forward

Symbol	Name	Function Class
Gm26579	predicted gene, 26579	174 bp downstream
Rr385348	regulatory region 385348	within coordinates