rs213205720 SNP Detail

Summary

• ID
  rs213205720
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:108089626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcctagcta gcatattggc tgagaatcac
  agtggagctg gctctggagg cacagatgta ggtgaggtga ctctaaatcc atgagaatag
  gagagttgac cttgctcctg ccaaaggcac cattgggtga ccttgcagga acagtactat
  W
  gaactttcct ggtggtgtgg ataagggaga gccagtggcc tgactagctc agttaccacc
  caggcccaga tccagggatc tgaattggcc tatggccaaa tctttatcat cttcaaatgc
  ttgtaatatg ggaaagtttt agtactgctg                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320453210	CHEV_2_108099438	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213205720					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:108089626 () rs orientation: forward

Symbol	Name	Function Class
D2Mit58	DNA segment, Chr 2, Massachusetts Institute of Technology 58	348 bp proximal
Gm13912	predicted gene 13912	within coordinates
Gm57698	predicted gene, 57698	1312 bp downstream