rs213246426 SNP Detail

Summary

• ID
  rs213246426
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96515394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTAACAGT GGCTGTACTA
  CTGAAGAAAA TGTCTCTTCC GGCAACCGTC AACTGTCAAA AATCCTTGTA AATCCTCCTG
  CACCCTACCA CAGGATGTTG GCTCCCAGTA TTGCACGGAT CTTGTATAGT ACAGACAACC
  ACAGCTGCTG TCAGGTAGAA TGGCTGAAGA GATGGCTGAA GGGTTTAGAG CACTTAGAGA
  R
  GAGTTCCCAG CACCCAAGTG GCAACTCACA ATGCTCTGTA ACTCTAGTTC CAGGGGATCC
  TACTCCTTCT GACCTTCAGG GACACTAAGC ACTCATTATG GTATACATAC ATGCAAGTAA
  ACACTCATAC ACATACAAAT AGAAATATCT TTGTACAAAA AATGTGACAG CCATGTCATG
  TCATGCCAAG AAAATTCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323111057	CHEV_9_96533760	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213246426					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96515394 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22167	CpG island 22167	1358 bp distal
Rasa2	RAS p21 protein activator 2	1729 bp upstream
Rr684997	regulatory region 684997	1234 bp distal
Rr684998	regulatory region 684998	1891 bp proximal
Tssr90976	transcription start site region 90976	1787 bp upstream