rs213269485 SNP Detail

Summary

• ID
  rs213269485
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175460224 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTCTATG AATACCATGT
  CCAGTACTGA TTATGTCTCT CTACCCTTCC ACACTCTTCC GTCTCCCACA TCTCCTCAGT
  CTCTCTTAAA ATTTTAGGTC TTCTTTCTTC TTCTTCTCTC CCTCTCTTAC CTCTCCCCAC
  CCCATGTATG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG CGCGCGCGCG CGCGCGCGCG
  M
  GTAATTTCCA TACGTGACAG AAAATATGCA GAACTTGTCT TATGTATTTA TATCTCACTT
  ATCCCAATGT CCTCCAAATC CACTCATTCT TACTGAGATG ACCTAAGACA CATTTTTGTT
  TTTAAATAAC AGGATTTCAT TCTTCTTTAC CGCCAAACAC TACTCCATTG TGTGTGTGTG
  TACCATATTT TCTTCATTCG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320151894	CHEV_1_177562789	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213269485					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175460224 () rs orientation: forward

Symbol	Name	Function Class
Kmo	kynurenine 3-monooxygenase	within coordinates
Rr396618	regulatory region 396618	539 bp downstream
Tssr10313	transcription start site region 10313	680 bp downstream
Tssr10314	transcription start site region 10314	657 bp downstream
Tssr10315	transcription start site region 10315	634 bp downstream
Tssr10316	transcription start site region 10316	601 bp downstream
Tssr10317	transcription start site region 10317	564 bp downstream
Tssr10318	transcription start site region 10318	557 bp downstream
Tssr10319	transcription start site region 10319	547 bp downstream
Tssr10320	transcription start site region 10320	525 bp downstream
Tssr10321	transcription start site region 10321	507 bp downstream
Tssr10322	transcription start site region 10322	498 bp downstream
Tssr10323	transcription start site region 10323	473 bp downstream