rs213289894 SNP Detail

Summary

• ID
  rs213289894
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117549489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGTTTCA ATCTTCAGTC
  TCTCAAAGAT TTAGTACTCG AAGTTTACCG TGTATACAAA GGTACACCAA AGGATGTCTC
  CCCAAAACAG ACTCCATGTC ATATTTGGAG ATGGCGTCTT AGAGGGAGGG CAGACACAGG
  TGTCACCCTG AATATCATCC CCCTTGTAAT ATATGTACTA ATATCTACAC TACTACGCGG
  S
  AGACAGCAGG CAGTGGCAGT ATTTGCTGGC TCGTGTCTGC CTGAGACAGT CTACGTGAGG
  CCATTTCACA TCTCTGGAGG CTGAAGATCC TTGCTCAGAC TGAGACTGCC GTAGGCCATC
  ACCGCTCTTC TGAGGGCAAC GCTAACATTC CAGAGTCTTT GCAAGACAAC CTTTTAATTG
  TCCCCTCACC CACACCTATC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323498911	CHEV_10_117150640	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213289894					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117549489 () rs orientation: forward

Symbol	Name	Function Class
Gm67727	predicted gene, 67727	within coordinates
Rr385357	regulatory region 385357	1033 bp downstream
Tssr95924	transcription start site region 95924	1828 bp downstream
Tssr99470	transcription start site region 99470	1654 bp downstream