rs213313962 SNP Detail

Summary

• ID
  rs213313962
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13819756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCGTTTCTC TTAGGAATGC
  TGTTACGGTT TGGGTCCTGA GTTAGAACTG TCACACGTGT GTTAGGTTAA CAGTCTGTAT
  TTATAACATG ACTGGCAACG GAGGGGGCAA GGTTGATGTG ATTCTCTTCC AGCCAGCTCG
  AGAGAAAAGG GAATGAGACC AAAGGGAGAC TTGAACACAG AGCCTTCTAC TCTCCGTGCC
  Y
  GTGAAGAATG GACGCCTTAT AGTAAAATCC CAGCACCTCA CTGTTGCAGC TGTGTTCGCT
  GCTGTATATG CAGATCTGAG GCTAGCTGTT TCTCCCTCTG ATTTTATGTG TTCTGAATCT
  GCTAATTTTT AGATGTGCAA TTATTGTATC TCCTTGATGC CCTGAGTTAT TTATCACTAG
  AATGTCCCCC CTTGTCTCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322509719	CHEV_8_13769756	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213313962					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13819756 () rs orientation: forward

Symbol	Name	Function Class
Cdc16	CDC16 cell division cycle 16	within coordinates
Gm46032	predicted gene, 46032	within coordinates
Tssr76425	transcription start site region 76425	1610 bp upstream