rs213331718 SNP Detail

Summary

• ID
  rs213331718
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127684278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCATGGGAG AATGAGCCCA
  ACAGGAAAAA TGTAGAAAAG AATGTGGAGG AGAGAAAAGG CAAGTTAGCG GAAAGAGACA
  CAGAGATCAG GGATTACCAA TTGGGATTAT CTGATGGAAA TATATATACT CTTCAAGACA
  AGAAATAAAC TATTTTCACC TCTTCTGAGG GGGTGGGGGT GGGGGGGACA CAGACTAGCA
  Y
  GGTAATTACT CACAGCACTG AATCCTCCTT CCCTGTGAAT TTTTGGGTAG CATTTGGCAT
  GGCTGACATT TTTTAAAATA TTTTTTATTA TTATGTATTT TCCTCAATTA CATTTAGAAT
  GCTATCCCAA AAGTCCCCCA TACCCTCCCC CCCACTTCCC TACCCACCCA TTCCCATTTT
  TTTGGCCCTG GCATTCCCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320957935	CHEV_3_127593547	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213331718					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127684278 () rs orientation: forward

Symbol	Name	Function Class
Fam241a	family with sequence similarity 241, member A	Intron
Rr584892	regulatory region 584892	705 bp distal
Rr584893	regulatory region 584893	308 bp distal
Rr584894	regulatory region 584894	167 bp proximal