rs213352257 SNP Detail

Summary

• ID
  rs213352257
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:9824177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAAAGTCT GTAAGCATTC
  ACAGAAACTC ACCTCCTGGA GCTTTGGCGT TCTCATTTGC CCATATACTC ATACCCTATT
  CCTGCGTTAG TCTGGTGTAT GGAACTATGA GCTCTCTTTT AGTATTTTAT TATAAATGCC
  TTTTAAGATT AAATTCTGAT ATAGTTAATC TCCCCAGTGT TCCAAGGTCC CAGAAGCCTA
  Y
  GAGCTTGGAA TCCAGCAGGA ATGCAGTAAG GAAGTTACCT ATTCAGTAAT AATTAAGCAT
  TACAAAAGAC GAAGCCAGTA GCTCAGAGCT GGTCTGCAAA ATATTTACTA AGGACAGTAG
  CAAATCTTAC CCAAAGTAGG GAATACCATA ATAGAGCCAG GGAATCCCAC TGAGATAGAA
  ATCTTCAGTA CAGGCTGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323558261	CHEV_11_9774180	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213352257					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:9824177 () rs orientation: forward

Symbol	Name	Function Class
Tssr106858	transcription start site region 106858	423 bp upstream
Tssr106859	transcription start site region 106859	361 bp upstream