rs213390513 SNP Detail

Summary

• ID
  rs213390513
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:68000038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggcagctga tagtcactgg tcatctagac
  ctagaaggtc tgataatctc ttctggcctc aacaggcatc tatatccacg tggcacatgt
  gcacacaGAG CGAgagagtg agagggaaag tgagagggag agagggagag ggagaggggg
  R
  gggGGGCACA TACACATATA TAAATATATA TAAAGTTAAA AAGATCTTTA AAACATATGT
  GTTAATTGTC TAGAACCAAA GGCAGTTAGC ACTGCAGTGT GTAGGCCTGG CTGTACTCCA
  GTTTATCTAC GCAGCTGGCA AGTGCAACTC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323351841	CHEV_10_67626956	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213390513					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:68000038 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Gm66190	predicted gene, 66190	within coordinates
Gm66212	predicted gene, 66212	608 bp downstream
Rr401964	regulatory region 401964	1141 bp upstream
Rr433213	regulatory region 433213	908 bp proximal
Rr433214	regulatory region 433214	1211 bp proximal