rs213496672 SNP Detail

Summary

• ID
  rs213496672
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155318796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCCAAGCCA AGGGAGGTCT GGGCATGAAA
  GGACAGACCC TGTTCAGGGA AGGAAGGGGG TGCCCCTACT CCTGCCTAAG GGGCCCCCTT
  GCCATCAGAA AACAGTAGTA TTTGCATGAA GGACACAGGA GCCCAGATGC CCAGGACAGG
  A
  AGCTCAGAGT AGAGATACAG AAGAAAGAAG AGAGGGAGGA GGCAAGGGGG AAGTAAGGGG
  GGGTGAGGAA GGAAGCCGCA CTCTGGGCTT CCAGGACAGC AGATAGCCAC CCACCACAGG
  ACAGACTTTT GTCTCTGCCA CTCCTCCCGG                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321441323	CHEV_4_154608448	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213496672					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155318796 () rs orientation: forward

Symbol	Name	Function Class
Gm52713	predicted gene, 52713	within coordinates
Rr1208	regulatory region 1208	340 bp upstream
Rr88175	regulatory region 88175	196 bp distal
Tssr40624	transcription start site region 40624	197 bp upstream
Tssr40625	transcription start site region 40625	1147 bp upstream