CCATAAATAT GAAGGTCTAT TTTGGGGTTC CCAGGTCCAT TGATCTGTCT GTCCTTTGCT GGTGCACGCT GCTTCATTTT CAGTAGTTAC ATGATAAATT CTAAATCTAA ACTGTTCTTT TTCAGAGCTG TCTTCTGTAA TCCTAAAAAT TATAGATATA GCCTGTCAAT TACTGCCTCA AACAAACATT AAAAAAAAAA M AAAAAGCAAA GATTTTAATG GGAATTATTT TGAATCTGAC AACCAATTCA GGCGAGGCAT GGTGGCATAC GCCTATAACC CCAGAACTCC AGAGGCAGGA GTAGGAGCAT TACCACAAGT CTGAGGCCAC CCTGGGCTGT ATAGTAGGTC CAGGCCACGA AATAACATAC ATCGAGACAG AAAGCAGTTC AGGAGCACTG M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SPRET/EiJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss355442865 | MGP_WTSI_2_119975862 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | A | C | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A | A | A | A | A | A | A | A | C | A | A | C | C | A | A | A | A | C |
SNP Consensus Information | ||||||||||||||||||||||||||||||||||||||||||||
SNP | Consensus Type | A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SPRET/EiJ |
WSB/EiJ |
||||
rs213514789 | SNP | A | C | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A | A | A | A | A | A | A | A | C | A | A | C | C | A | A | A | A | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss355442865 | MGP_WTSI_2_119975862 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/C |
Location: Chr2:119980607 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ehd4 | EH-domain containing 4 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr563646 | regulatory region 563646 | 1607 bp distal | ||||||
Rr563647 | regulatory region 563647 | 944 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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