rs213543600 SNP Detail

Summary

• ID
  rs213543600
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96510501 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGGGTATA ATGGAGGGGG
  GTGCATACAA ACTACCTTTA GGTATGCTAC TTATATCAAA GTAGTTCAGA CCAAAAATAC
  TCCTAATTTT GTTTACTAAA GGTTCAGATG AAAATTCTAA GATATCTAAC AACTTTGTGT
  CGTGAATTCA GGTAAGGAAG CTGAACATTC AAAACCCTCA GGATATCTAG GACACTAAAA
  Y
  GCCCTAAGAA ACTGGGTACT AATCAGTCTA TAACACAAAA TACTGTCTGC GATAATAGAT
  TTCTTTAAAC TGGTTGTGTG AAAACAGCTA TATGATGGTC TCTGTGTGTG TGTGTGTGTG
  TGTGTGTTTG TGTGGTGTGT GTACTTGTTA ATGTACTGAC TGTGTGCACT AGCTGTGTGT
  GCATGTGCAT GCCCATGGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323111040	CHEV_9_96528867	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213543600					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96510501 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22167	CpG island 22167	1995 bp proximal
Rasa2	RAS p21 protein activator 2	within coordinates