rs213549622 SNP Detail

Summary

• ID
  rs213549622
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142033801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAC TTCCATCTTG TTGGGTGTGG
  G
  GATGCCTGAG TGGCACCACC CTTGC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321394808	CHEV_4_141862405	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213549622					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142033801 () rs orientation: forward

Symbol	Name	Function Class
Gm13052	predicted gene 13052	1275 bp downstream
Gm68665	predicted gene, 68665	within coordinates
Kazn	kazrin, periplakin interacting protein	within coordinates
Rr92931	regulatory region 92931	within coordinates
Rr97050	regulatory region 97050	1698 bp distal
Tssr40127	transcription start site region 40127	1218 bp upstream