rs213568248 SNP Detail

Summary

• ID
  rs213568248
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152733039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTG TGCAGTGGCG GGCTGTGTGC
  W
  GTGGTGGGCC GTGTGCAGTG GTGGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321435535	CHEV_4_152022691	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213568248					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152733039 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15417	CpG island 15417	1346 bp distal
Gm69406	predicted gene, 69406	within coordinates
Gm69411	predicted gene, 69411	1914 bp upstream
Rr87959	regulatory region 87959	439 bp distal
Rr93365	regulatory region 93365	1039 bp distal
Rr97434	regulatory region 97434	390 bp distal
Rr103964	regulatory region 103964	1963 bp proximal