rs213572958 SNP Detail

Summary

• ID
  rs213572958
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95698785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCAGCCCT GCTGACTCCT
  TCTGGACTCC AGAACCAACA AGACATTTGT GTTCTTTAAG CCACTCGGTC TTTAGTACTT
  CGTTATAGAA CCCAGGCAGA CCCCTATACC TTGAGGTTGG TGACATTTAC TACATGAAGA
  TCGTGGCAAT GCTGAGCCTT GGGCTGGAGA GATGGCTCAG TGGTTAAAAC CACTGACTGC
  W
  CTTCCAGAGG TCCTGAGTTC AATTCCCAGC AACCACATGA TGGCTCACAA CCATCTATAA
  TGGGATTCCA GTGCCCTTTT CTGGTGTGTC TGAAGACAGC AACAGTGTAC TCATACAGAA
  AATAGATAAA TACATCTTTT AAAAAGAACA CAGCAGGGCG TGGTGGCACA TGCCTTTAAT
  CCCAGTACTC GGGAAGCAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809555	CHEV_8_97496057	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213572958					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95698785 () rs orientation: forward

Symbol	Name	Function Class
Gm30968	predicted gene, 30968	within coordinates
Gm64162	predicted gene, 64162	1938 bp downstream
Rr191276	regulatory region 191276	1186 bp distal
Tssr78926	transcription start site region 78926	1410 bp upstream
Tssr82521	transcription start site region 82521	1170 bp downstream