rs213619203 SNP Detail

Summary

• ID
  rs213619203
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:104424606 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATCG TGGACTTTTA ACTAATCACC
  M
  GATAGCGTGG AGAAGGTAAT GATGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324514941	CHEV_13_105078178	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213619203					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:104424606 () rs orientation: forward

Symbol	Name	Function Class
Adamts6	ADAM metallopeptidase with thrombospondin type 1 motif 6	within coordinates
Gm60746	predicted gene, 60746	883 bp upstream
Gm60750	predicted gene, 60750	745 bp downstream
Rr369763	regulatory region 369763	925 bp downstream
Rr403946	regulatory region 403946	1780 bp downstream
Rr485430	regulatory region 485430	988 bp distal
Rr485431	regulatory region 485431	215 bp distal
Rr485432	regulatory region 485432	within coordinates
Rr485433	regulatory region 485433	1191 bp proximal
Tssr120915	transcription start site region 120915	1036 bp downstream
Tssr120916	transcription start site region 120916	991 bp downstream
Tssr120917	transcription start site region 120917	966 bp downstream
Tssr120918	transcription start site region 120918	951 bp downstream
Tssr120919	transcription start site region 120919	719 bp downstream
Tssr120920	transcription start site region 120920	632 bp downstream
Tssr120921	transcription start site region 120921	600 bp downstream
Tssr120922	transcription start site region 120922	574 bp downstream
Tssr120923	transcription start site region 120923	216 bp downstream
Tssr120924	transcription start site region 120924	175 bp downstream
Tssr120925	transcription start site region 120925	136 bp downstream