rs213624801 SNP Detail

Summary

• ID
  rs213624801
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36076775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtgcatgtg aggcaaactc cctacccact
  gagccacatc cccagcTTAT TTAATCTTAT Gttctgtaga actggaaact gaacttaggg
  ccttgcacgc gctaggcaag tgctatacca ttgagtggta tcccagccTT CTTGAAAAAA
  R
  ATTTGTGCtt gtttttgaga caggtttttt tgtgtagctc tggctgtcct ggaactcact
  atgtagacca gcctggtctc aaactgtccc tctgcctatg cctcctaagt gctgggatta
  aagacatatg ccactattac cctgcAAGTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325584127	CHEV_18_36103376	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213624801					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36076775 () rs orientation: forward

Symbol	Name	Function Class
Gm56493	predicted gene, 56493	within coordinates
Rr536031	regulatory region 536031	1314 bp distal
Rr536032	regulatory region 536032	1764 bp distal
Rr536033	regulatory region 536033	512 bp distal
Tssr150585	transcription start site region 150585	1313 bp downstream