rs213671400 SNP Detail

Summary

• ID
  rs213671400
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32008649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGA AGCTGGAGAA GGTGACTGTT
  A
  GCTCACTGTG TTGTGTTGAC AGAGT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323629158	CHEV_11_31958649	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213671400					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32008649 () rs orientation: forward

Symbol	Name	Function Class
Nsg2	neuron specific gene family member 2	within coordinates
Tssr100825	transcription start site region 100825	966 bp downstream
Tssr100826	transcription start site region 100826	865 bp downstream
Tssr100827	transcription start site region 100827	193 bp upstream
Tssr100828	transcription start site region 100828	240 bp upstream