rs213681346 SNP Detail

Summary

• ID
  rs213681346
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48194182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTAAAGAA CTTCCTCTCC
  CTTCGGGACA CAACCATAGT CACCCGCAGC TGTGTTGCTG TAGTCCTCCT AATAAATACG
  TCATGGGACC AACAGGCAGG ACGTCTGTGT GTGGGATTCG CCCTACTGTG ACACAAGACT
  GTGGAATGAG ACCTTTTCAC TGTCATCTTG TCACAGCAGC ATCCAATAGA TGGTTCCCTA
  Y
  AGACAGAAGC ATCTGTGTGG GAGTGAAGAA GTCCAGGCAA GACTTCCAGG ACACACTGAA
  GAAACCAAAT GTGGTTTTAT GACACTTGTC AGCTTTTCCC AAGACAGCAC AGGCAGCTGG
  GTGAGCATTG GGTACCCAGC TAGGTCCAAG AGGTCCGCTT CTTCCTTGCC TTGCTTTGAG
  TACTGAAACG GAACAAGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322952938	CHEV_9_48090965	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213681346					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48194182 () rs orientation: forward

Symbol	Name	Function Class
Gm51672	predicted gene, 51672	424 bp upstream
Nxpe4	neurexophilin and PC-esterase domain family, member 4	within coordinates
Rr203996	regulatory region 203996	135 bp distal
Rr203997	regulatory region 203997	1175 bp proximal