rs213684018 SNP Detail

Summary

• ID
  rs213684018
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:108539271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAG GGCAGCCGGA AGTAGACTTC
  G
  GGGCGGAAGC CAGGCTAGTA CGACT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323192700	CHEV_9_108564403	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213684018					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:108539271 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22350	CpG island 22350	within coordinates
Rr401686	regulatory region 401686	within coordinates
Rr686857	regulatory region 686857	within coordinates
Slc25a20	solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	64 bp upstream
Tssr87151	transcription start site region 87151	12 bp upstream
Tssr87152	transcription start site region 87152	27 bp upstream