rs213692795 SNP Detail

Summary

• ID
  rs213692795
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:92133813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGA CCTCAAGTTG AGCAACACCC
  Y
  CTGTTTGTAG TGTCCACTGA ACACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323071641	CHEV_9_92146598	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213692795					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:92133813 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22145	CpG island 22145	1004 bp distal
Gm67683	predicted gene, 67683	1243 bp upstream
Plscr1	phospholipid scramblase 1	within coordinates
Rr206878	regulatory region 206878	within coordinates
Rr383753	regulatory region 383753	389 bp downstream
Rr401603	regulatory region 401603	1135 bp upstream
Tssr86498	transcription start site region 86498	1726 bp downstream
Tssr86499	transcription start site region 86499	1700 bp downstream
Tssr86500	transcription start site region 86500	1692 bp downstream
Tssr86501	transcription start site region 86501	1662 bp downstream
Tssr86502	transcription start site region 86502	1633 bp downstream
Tssr86503	transcription start site region 86503	1573 bp downstream
Tssr86504	transcription start site region 86504	1486 bp downstream
Tssr86505	transcription start site region 86505	1449 bp downstream
Tssr90887	transcription start site region 90887	1274 bp upstream
Tssr90888	transcription start site region 90888	1232 bp upstream