rs213724700 SNP Detail

Summary

• ID
  rs213724700
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:69998991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGCTTGGA GAGATGGACA
  CCACCCCCAT AGGCCCTTTT TGCCTTTGGG CATCTCTCAC CAGACCTAAA ATCCCAAGGT
  GGGATCCAGC AACCTATCTC TGACACCTTT TCTCTCCTCT GCCCAACCCC AGAAGCCCAG
  TAGTAAGGGA CCTCCCCGTT AACGCCAAAG CCAGACCTGC AGACCTGCAA GTCACTAGGC
  R
  GGGCGGGGGG GGGGGAGTTT TAATGACACA GATGCCATAT TAAGTGAGGC AGTTTTACAA
  TTCACATTGA ATGGGACGCT AACTTATTAC AAGTACGTTA TCAGAAGGAC GATAAGATTT
  ATAACTCTAA GAGTCAGCTT TGCGCCTTAA TGACAATGGA TGCTGGGGAG GAAATCTGTT
  CTGGATTAGA GGAGTTGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322251016	CHEV_7_77494129	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213724700					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:69998991 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19248	CpG island 19248	1284 bp distal
Cpgi19249	CpG island 19249	526 bp distal
Cpgi19250	CpG island 19250	1605 bp proximal
Gm44948	predicted gene 44948	1547 bp upstream
Rr648636	regulatory region 648636	1558 bp distal
Rr648637	regulatory region 648637	1057 bp distal
Rr648638	regulatory region 648638	within coordinates
Rr648639	regulatory region 648639	1060 bp proximal