rs213735150 SNP Detail

Summary

• ID
  rs213735150
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21726533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACAGAGT TTGTTTCAGA
  ATCTGGGTTC CCATGACTCC AGCTTCTTTT TGTCCATAGA GTCACCCTAA AGGTCCCTTG
  TCCCAAGAAT CCCTTGCATA GCTTGCTACA AGAAAGCCCA AGACAGGTCA GTTTCTCTGC
  CGAAGAACTG CATGGCTTGT AAAAGGTACA TCTAACCCAA ACAATCACTA CCACCCCCCC
  M
  CCCCCCCACC CCCCCACCCC CCCGTCTTTC CCTTAGACTC CAGGGTCTTC TTCAGGTTGG
  TAGACCTCTG ATCATTCAGT GTCTTCATTG CAAAGCTTGC TAACTTCAAG TCCTGGGAAT
  AGCATCATCT TTGATGACTC TCACCCCTCC CAGTGTATAT GAATGTGAAT GTGTTGGGAC
  AAGCCACTGG GAGTAAAATC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	CE/J	CZECHII/EiJ	FVB/NJ	MA/MyJ
ss357211643	MGP_WTSI_3_21571291	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	CE/J	CZECHII/EiJ	FVB/NJ	MA/MyJ
rs213735150					SNP	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss357211643	MGP_WTSI_3_21571291	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21726533 () rs orientation: forward

Symbol	Name	Function Class
Rr374653	regulatory region 374653	within coordinates
Rr574145	regulatory region 574145	within coordinates