rs213756205 SNP Detail

Summary

• ID
  rs213756205
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92477789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAA TACAGATTTT TTTAAAAGAT
  R
  AGGTCAAGGT CTCACTATGT ATAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321612283	CHEV_5_92758956	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213756205					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92477789 () rs orientation: forward

Symbol	Name	Function Class
Art3	ADP-ribosyltransferase 3	1897 bp upstream
Cxcl9	C-X-C motif chemokine ligand 9	1851 bp upstream
Rr123698	regulatory region 123698	1977 bp distal
Tssr47295	transcription start site region 47295	1863 bp upstream
Tssr47296	transcription start site region 47296	1888 bp upstream
Tssr47297	transcription start site region 47297	1898 bp upstream
Tssr51875	transcription start site region 51875	1865 bp upstream
Tssr51876	transcription start site region 51876	1844 bp upstream