rs213759619 SNP Detail

Summary

• ID
  rs213759619
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120550609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCAGGGCC AGCTCTTCCT
  TGGATCCATG TAGTACAAGT ATCTACCTGT AACCTTAGTG CAGGTGGGGC TAGATAGGAA
  ACCCTGTAAG CCAACTGGTT TAGCCAATCG GTGAGTCTCA GGTTCAGTAA GAACAATGCT
  CACTGACAAG TACACACTAC CTCCCACTAT GGCTGCAGGA GCTGGGCATG ATGGCTCATA
  Y
  TTGTAATCCA CACTTGGGGA GGCAGAGGCA GGAAGAAATC TGTGAATTTA AGACCAACAT
  GGACTACAGA TTGAGATCCT ATTTGAAAAT CCACATGTAT GTGTCTAGAG TGATGGCTCA
  GAGGTTGAGA GTTGCTTGTT GCTCTGCAAA TCAATTCTCA GTACTGACAT GGTAGCTCAT
  AGCCACCCTT GTTCTAGGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320479599	CHEV_2_120545864	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213759619					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120550609 () rs orientation: forward

Symbol	Name	Function Class
Cdan1	codanin 1	within coordinates
Rr37786	regulatory region 37786	1392 bp proximal
Stard9	StAR related lipid transfer domain containing 9	within coordinates